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i2b2 Requirements
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i2b2 Software Requirements
In regards to the i2b2 on OMOP project, the i2b2 Software requirements are very simple;
- Your i2b2 server needs to be running on version 1.7.09 in order to query multiple OMOP CDM tables.
- Admin module needs to be installed on your i2b2 server.
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<div class="i2b2-panel"> <table class="i2b2-note"> <colgroup> <col width="24"> <col> </colgroup> <tbody> <tr> <td> <img src="https://community.i2b2.org/wiki/download/attachments/14091764/icon_note.png" width="16" height="16" align="absmiddle" alt="info" border="0"> </td> <td> <b>Note</b> <br>The current 1.7.09 release is a release candidate and the link to download it can be found on the <a href="https://community.i2b2.org/wiki/display/OMOP/Release+1.7.09-RC1#omop-software-download-1709-rc1">Release 1.7.09-RC1 page</a>. </td> </tr> </tbody> </table> </div> |
i2b2 Database Requirements
Download the data package to install the crcdata, metadata and workdata tables.
Your existing installation of the hivedata and pmdata tables will be used; so unless you are setting up a completely new instance of i2b2 you do not need to setup these tables.
OMOP Requirements
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OMOP CDM - Data Requirements
- OMOP CDM version 5 is implemented.
- i2b2 tables reside in the same database and schema as your CDM tables.
- CMS SynPUF 1K data set is loaded into the CDM tables.