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The project also examines necessary features required for display and comparison of genomic variants within external tools.   An application has been developed to show interactive capability within the VISTA suite of visual analysis and functional annotation tools.

Paper and Presentations

Use of Genomic Variants in i2b2 - Lori C. Phillips MS1, Simon Minovitsky2, Igor Ratnere2, Inna Dubchak Ph.D.2,3, Isaac Kohane MD Ph.D.4, Shawn N. Murphy MD Ph.D.5 Partners Healthcare Systems, Charlestown, MA, 2DOE Joint Genome Institute, Walnut Creek, CA, 3Lawrence Berkeley National Laboratory, Berkeley, CA, 4Children's Hospital, Boston, MA, 5Massachusetts General Hospital, Boston, MA