Genomic NGS Tool
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We are also able to process data provided in GVF version 1.05 or 1.06.

The first eight columns are as per the GVF standard and represent:

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The last column is a series of value/type pairs. 

      The following are currently recognized by the tool and itemized for i2b2:  Variant_feature, Gene and Genotype.

Genomic NGS Tool GIT