SETL - Standards-based Extract, Transform, and Load
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SETL - Standards-based Extract, Transform, and Load SETL

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Click on the links below to read our recent AMIA abstract and see our presentation slides.

Wiki MarkupKlann J, Porter A, Wattanasin N, Murphy S. [Importing Continuity of Care Documents into i2b2 and SMART.|SETL^jklann-CRI2014abstract_v03_revision.pdf] _AMIA Joint Summits_ 2014;143. \[ [associated slides|SETL^jklann-amia14cri-setltalk-forpdf.pdf]\]

Use case 2: Import CCD documents directly into the i2b2 data repository

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Software release and related tools

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Our first public release will be made available in the coming months and will include:

  • Complete source code
  • A graphical tool to import CCDs
  • Meaningful Use ontologies:

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    • SNOMED
    • RxNorm
    • Meaningful Use -compatible demographics

Currently, the SNOMED ontology is available for download [or extract a newer version].

Related project: OHT-MDMI [software release available in May] 
Related project: SMART-i2b2
Related project: QueryHealth

  • Wiki Markup
    [SNOMED|http://i2b2.bioontology.org/] \[or extract a [newer version|NCBO:NCBO Ontology Tools]\]
  • Wiki Markup
    RxNorm _\[coming soon\]_
  • Wiki Markup
    _\[more to come\]_

Wiki MarkupRelated project: [OHT-MDMI|http://www.semantxinc.com/ohtmdmi-project.html] _\[software release available in May\] _ Related project: [SMART-i2b2|SMArt:SMART i2b2] Related project: [QueryHealth|queryhealth:]

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SETL - Standards-based Extract, Transform, and Load SETL