Additional Tutorials and Documentation
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links ( bit.do/i2b2amia )

  1. workspace

  2. interaction

October 30, 2021 from 1:00 PM to 4:30 PM

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Start_timeSessionMinutes
1:00 PMAudience intro + env : Kavi Wagholikar20
1:20 PMShawn Murphy: 20000 foot view20
1:40 PMJeff Klann: Query Tool and networks20
2:00 PMTeam formation 15
2:15 PMBREAK15
2:30 PMMike Mendis: i2b2 on OMOP database20
2:50 PMKavi Wagholikar: Loading Data20
3:10 PMTeam discussions40
3:50 PMWrap up and award ceremony40
4:30 PMEnd-




Details

Welcome and introduction: Kavi 

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  1.  Exercise 5: Create and upload simple concept ontology and facts: (video)
    1. Files:
      1. ex5_concepts.csv
      2. ex5_facts.csv
  2.  Exercise 6: Create and upload concepts with various data-types (video)
    1. Files
      1. ex6_concepts.csv
      2. ex6_facts.csv
  3. How i2b2 is helpful for lab level projects:
    1. Enforces data dictionary & discipline
    2. Query tool validates SQL for reporting

workshop Team projects


Additional Tutorials and Documentation docs2