OMOP
Space shortcuts
Space Tools
OMOP OMOP

You are viewing an old version of this page. View the current version.

Compare with Current View Page History

« Previous Version 2 Next »

Data Installation: Table of Contents

 

 

About this chapter

The data installation chapter outlines the process of installing the i2b2 data that is specific to the i2b2 on OMOP project. This process involves creating tables, procedures, views as well as loading data into the tables. The data being loaded is based off the CMS SynPUF 1k sample data that is provided by OMOP.

Pre-requisites

 Before moving forward with the installation of the i2b2 on OMOP tables the following requirements must be met.

Requirements Section

  Installed your i2b2 hivedata and pmdata tables and loaded the data provided in the standard i2b2 data file.
  Installed your CDM tables and loaded data from the SynPUF sample data file
  CDM tables reside in the same database / schema as your i2b2 tables
 

NOTE:

In your i2b2 database you may or may not have installed the crcdata and metadata tables that are provided in the standard i2b2 data package. 

 

Order of Installation

It is important the tables, procedures, and views are installed in the order defined below. Failure to do so will result in errors when running the scripts.

  • crcdata: create tables
  • crcdata:

 

  • No labels

OMOP OMOP